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Species belonging to selected taxon:
Oryza sativa
ABOUT THIS RECORD
ID:
MNEST004181
species:
Oryza sativa
miRNA family:
MIRf341
source:
miRNEST
Taxonomy by NCBI:
Oryza sativa
Oryza
Oryzeae
Ehrhartoideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CTCTAGCATTACCCACATTTA
miRNA*
AATGTGGGCAATGCTAGAAAG
mismatches:
2
bulges:
0
View larger
pre-miRNA
CTCCACCACTG
CTCTAGCATTACCCACATTTA
TATAGATGTTAATGAATCTAGCACATATATGTCTAGATTTATTAACACAAATATG
AATGTGGGCAATG
CTAGAAAG
TCTTATAA
dot-bracket secondary structure
.......(((.
.(((((((((.((((((((((
(((...(((((((((((((((.(((....))))))))))))))))))...)))))
)))))))).))))
))))).))
).......
SIMILARITIES
miRBase
osa-MIR819e
:
2e-33
PMRD
osa-miR819e
:
2e-33
microPC
miR819
:
4e-22
UniProt
no hits
RFAM
MIR1122: 1e-28
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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